Isoflavonoids: Molecular Regulation, Ecological Functions, and Health Applications
Özet
Isoflavonoids constitute a specialized class of plant secondary metabolites predominantly synthesized in legumes, characterized by their unique 3-phenylchroman backbone formed through the action of isoflavone synthase (IFS). These compounds occupy central roles in plant defense, microbial communication, and environmental adaptation, acting as phytoalexins essential for disease resistance and symbiotic nitrogen fixation (1,2). Isoflavonoid biosynthesis is controlled by a multi-layered regulatory network involving transcription factors (MYB, bHLH, bZIP, WRKY), epigenetic marks (DNA methylation, histone modifications), post-transcriptional regulation (miRNAs, siRNAs), and dynamic metabolon formation (3-7). Environmental signals, which, include light, drought, salinity, UV-B radiation, and pathogen attack, strongly influence these regulatory modules, inducing rapid transcriptional reprogramming of biosynthetic genes (8-15). In human health, isoflavonoids, particularly genistein, daidzein, and the microbial metabolite equol, exhibit phytoestrogenic, antioxidant, and anti-inflammatory properties (16-20). Their effects are shaped by gut microbiota, absorption efficiency, and metabolic polymorphisms, offering opportunities for personalized nutrition and therapeutic applications (21-23). This chapter integrates isoflavonoid biosynthetic mechanisms, regulatory networks, ecological functions, and human health implications, discussing future directions in biotechnology, agriculture, and medicine.
Referanslar
Geng D, Shen X, Xie Y, Yang Y, Bian R, Gao Y, Li P, Sun L, Feng H, Ma F, Guan Q. Regulation of phenylpropanoid biosynthesis by MdMYB88 and MdMYB124 contributes to pathogen and drought resistance in apple. Horticulture Research. 2020;7: 102.
Yu O, Jez JM. Nature's assembly line: biosynthesis of simple phenylpropanoids and polyketides. The Plant Journal. 2008;54(4): 750-762.
Sajid M, Stone SR, Kaur P. Recent Advances in Heterologous Synthesis Paving Way for Future Green-Modular Bioindustries: A Review With Special Reference to Isoflavonoids. Frontiers in Bioengineering and Biotechnology. 2021;9: 673270.
Shimada N, Akashi T, Aoki T, Ayabe S. Induction of isoflavonoid pathway in the model legume Lotus japonicus: molecular characterization of enzymes involved in phytoalexin biosynthesis. Plant Science. 2000; 160(1): 37–47.
Yi J, Derynck MR, Li X, et al. single-repeat MYB transcription factor, GmMYB176, regulates CHS8 gene expression and affects isoflavonoid biosynthesis in soybean. The Plant Journal. 2010;62(6); 1019-1034.
Xu W, Dubos C, Lepiniec L. Transcriptional control of flavonoid biosynthesis by MYB-bHLH-WDR complexes. Trends in Plant Science. 2015;20(3): 176-185.
Hayashi K, Alseekh S, Fernie AR. Genetic and epigenetic control of the plant metabolome. Proteomics. 2023;23(13-14): e2200104.
Lee SG, Krishnan HB, Jez JM. Structural basis for regulation of rhizobial nodulation and symbiosis gene expression by the regulatory protein NolR. PNAS. 2014 Apr 29;111(17): 6509-14.
Hassan S, Mathesius U. The role of flavonoids in root-rhizosphere signalling: opportunities and challenges for improving plant-microbe interactions. The Journal of Experimental Botany. 2012;63(9): 3429-44.
Yasmin F, Zhang H, Leamy L, Wang B, Winnike J, Reid RW, Brouwer CR, Song BH. Genetic basis and selection of glyceollin elicitation in wild soybean. Frontiers in Plant Science. 2024;15: 1240981.
Lygin AV, Zernova OV, Hill CB, et al. Glyceollin is an important component of soybean plant defense against Phytophthora sojae and Macrophomina phaseolina. Phytopathology. 2013;103(10): 984-94.
Yang Q, Wang G. Isoflavonoid metabolism in leguminous plants: an update and perspectives. Frontiers in Plant Science. 2024;15: 1368870.
Nakabayashi R, Yonekura-Sakakibara K, Urano K. et al. Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids. The Plant Journal. 2014;77(3): 367-79.
Jenkins GI. Signal transduction in responses to UV-B radiation. Annual Review of Plant Biology. 2009;60: 407–431.
Lämke J, Bäurle I. Epigenetic and chromatin-based mechanisms in environmental stress adaptation and stress memory in plants. Genome Biology 2017;18(1): 124.
Weston LA, Mathesius U. Flavonoids: their structure, biosynthesis and role in the rhizosphere, including allelopathy. Journal of Chemical Ecology 2013;39(2): 283–297.
Hu L, Robert CAM, Cadot S, et al. Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota. Nature Communications. 2018;9: 2738.
Zhalnina, K., Louie, K.B., Hao, Z. et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly. Nature Microbiology 2018;3: 470–480.
Setchell KDR, Clerici C. Equol: history, chemistry, and health effects. The Journal of Nutrition. 2010;140(7): 1355S–1362S.
Lampe JW. Isoflavonoid metabolism and health outcomes. Annual Review of Nutrition. 2007;27: 505–531.
Yoshikata R., Myint KZY, Taguchi J. Comparison of blood and urine concentrations of equol by LC-MS/MS method and factors associated with equol production in 466 Japanese men and women. PLoS ONE. 2024;19(3): e0288946.
Saito K, Matsuda F. Metabolomics for functional genomics, systems biology, and biotechnology. Annual Review of Plant Biology. 2010;61: 463–489.
Vogt T. Phenylpropanoid biosynthesis. Molecular Plant. 2010;3(1): 2–20.
Dao TT, Linthorst HJ, Verpoorte R. Chalcone synthase and its functions in plant resistance. Phytochem Rev. 2011;10(3): 397-412.
Chezem WR, Clay NK. Regulation of plant secondary metabolism and associated specialized cell development by MYBs and bHLHs. Phytochemistry. 2016;131: 26-43.
Nakayama T, Takahashi S, Waki T. Formation of Flavonoid Metabolons: Functional Significance of Protein-Protein Interactions and Impact on Flavonoid Chemodiversity. Frontiers in Plant Science. 2019;10: 821
Sharma D, Tiwari M, Pandey A, Bhatia C, Sharma A, Trivedi PK. MicroRNA858 Is a Potential Regulator of Phenylpropanoid Pathway and Plant Development. Plant Physiology. 2016;171(2): 944-59.
Ražná K, Harenčár Ľ, Kučka M. The Involvement of microRNAs in Plant Lignan Biosynthesis-Current View. Cells. 2022;11(14): 2151.
Polturak G, Misra RC, El-Demerdash A, et al. Discovery of isoflavone phytoalexins in wheat reveals an alternative route to isoflavonoid biosynthesis. Nature Communications 2023;14(1): 6977.
Hideg E, Jansen MA, Strid A. UV-B exposure, ROS, and stress: inseparable companions or loosely linked associates? Trends in Plant Science. 2013;18(2): 107-15.
Dissanayake BM, Staudinger C, Ranathunge K, et al. Metabolic adaptations leading to an enhanced lignification in wheat roots under salinity stress. The Plant Journal. 2024;119(4): 1800-1815.
Wasternack C, Hause B. Jasmonate–salicylate crosstalk. Annals of Botany. 2013;111(6): 1021–1058.
Cui Q, Li X, Hu S, Yang D, Abozeid A, Yang Z, Jiang J, Ren Z, Li D, Li D, Zheng L, Qin A. The Critical Role of Phenylpropanoid Biosynthesis Pathway in Lily Resistance Against Gray Mold. International Journal of Molecular Sciences. 2024;25(20): 11068.
Rodríguez-Morató J, Farré M, Pérez-Mañá C, et al. Pharmacokinetic Comparison of Soy Isoflavone Extracts in Human Plasma. Journal of Agricultural and Food Chemistry. 2015;63(31): 6946-53.
Rafii F. The role of colonic bacteria in the metabolism of the natural isoflavone daidzin to equol. Metabolites. 2015;5(1): 56-73.
Sharifi-Rad J, Quispe C, Imran M, et al. Genistein: An integrative overview of its mode of action, pharmacological properties, and health benefits. Oxidative Medicine and Cellular Longevity. 2021;2021: 3268136.
Shirvanian K, Vali R, Farkhondeh T, et al. Genistein Effects on Various Human Disorders Mediated via Nrf2 Signaling. Current Molecular Medicine. 2024;24(1): 40-50.
Goh YX, Jalil J, Lam KW, Husain K, Premakumar CM. Genistein: A Review on its Anti-Inflammatory Properties. Frontiers in Pharmacology. 2022;13: 820969.
Ionescu VS, Popa A, Alexandru A, Manole E, Neagu M, Pop S. Dietary Phytoestrogens and Their Metabolites as Epigenetic Modulators with Impact on Human Health. Antioxidants (Basel). 2021;10(12): 1893.
Taku K, Melby MK, Kronenberg F, et al. Extracted or synthesized soybean isoflavones reduce menopausal hot flash frequency and severity: systematic review and meta-analysis of randomized controlled trials. Menopause. 2012;19(7): 776-90.
Barańska A, Kanadys W, Bogdan M, Stępień E, Barczyński B, Kłak A, Augustynowicz A, Szajnik M, Religioni U. The Role of Soy Isoflavones in the Prevention of Bone Loss in Postmenopausal Women: A Systematic Review with Meta-Analysis of Randomized Controlled Trials. Journal of Clinical Medicine. 2022;11(16): 4676.
Chen LR, Ko NY, Chen KH. Isoflavone Supplements for Menopausal Women: A Systematic Review. Nutrients. 2019;11(11): 2649.
Zhang P, Du H, Wang J, Pu Y, Yang C, Yan R, Yang H, Cheng H, Yu D. Multiplex CRISPR/Cas9-mediated metabolic engineering increases soya bean isoflavone content and resistance to soya bean mosaic virus. Plant Biotechnology Journal. 2020;18(6): 1384-1395.
Liu Q, Liu Y, Li G, Savolainen O, Chen Y, Nielsen J. De novo biosynthesis of bioactive isoflavonoids by engineered yeast cell factories. Nature Communications. 2021;12(1): 6085.
Alexandrov T. Spatial metabolomics and imaging mass spectrometry in the age of artificial intelligence. Annual Review of Biomedical Data Science. 2020;3: 61–87.